Xavier Robin : Curriculum Vitae
Education
Since 2007, Université of Geneva
- PhD in sciences (interdisciplinary: medicine and bioinformatics)
2007, University Hospital of Geneva
- Specialization internship
2005–2007, University of Geneva
- Masters degree in proteomics and bioinformatics (faculty of medicine and sciences and Swiss institute of Bioinformatics)
- Internship “Tools for proteomic standards” (web interface for a MIAPE document) at the Swiss institute of Bioinformatics
2002–2005, University of Geneva
- Bachelor in Biologiy (faculty of sciences)
- Monograph “A dual role for Ded1p helicase?”
Bibliography
Papers as first author
- Robin X., Hoogland C., Appel R. D., Lisacek F. (2008). MIAPEGelDB, a web-based submission tool and public repository for MIAPE Gel electrophoresis documents. Journal of Proteomics 71 (2), p. 249–251. PMID: 18590991. DOI: 10.1016/j.jprot.2008.06.005. 11 references, 13 citations.
- Robin X., Turck N., Hainard A., et al. (2009). Bioinformatics for protein biomarker panel classification: What is needed to bring biomarker panels into in vitro diagnostics? Expert Review of Proteomics 6 (6), p. 675–689. PMID: 19929612. DOI: 10.1586/EPR.09.83. 94 references, 5 citations.
- Robin X., Turck N., Hainard A., et al. (2011). pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics 12, p 77. PMID: 21414208. DOI: 10.1186/1471-2105-12-77. 32 references, 8 citations.
Papers as co-author
- Hoogland C., Walther D., Palagi P. M., et al. (2008). A suite of tools to analyse and publish 2-DE data. Proteomics 8 (23-24), p. 4907–4909. PMID: 19072735. DOI: 10.1002/pmic.200800301. 3 citations.
- Hainard A., Tiberti N., Robin X., et al. (2009). A Combined CXCL10, CXCL8 and H-FABP Panel for the Staging of Human African Trypanosomiasis Patients. PLoS Neglected Tropical Diseases 3 (6), p. e459. PMID: 19554086. DOI: 10.1371/journal.pntd.0000459. 19 citations
- Turck N., Vutskits L., Sanchez-Pena P., et al. (2010). A multiparameter panel method for outcome prediction following aneurysmal subarachnoid hemorrhage. Intensive Care Medicine 36 (1), p. 107–115. PMID: 19760205. DOI: 10.1007/s00134-009-1641-y. 4 citations.
- Hainard A., Tiberti N., Robin X., et al. (2010). Matrix metalloproteinase-9 and intercellular adhesion molecule 1 are powerful staging markers for human African trypanosomiasis. Tropical Medicine and International Health, 16 (1), p. 119–126. 3 citations.
- Tiberti N, Hainard A, Lejon V, et al. (2010). Discovery and verification of osteopontin and beta-2-microglobulin as promising markers for staging human African trypanosomiasis. Molecular & Cellular Proteomics, 9 (12), p. 2783–2795. PMID: 20724469. DOI: 10.1074/mcp.M110.001008. 5 citations.
Websites & Tools
- MIAPEGelDB, a web-based database to create and store MIAPE Gel documents.
- pROC, a tool for ROC curves in R and S+.
- Liberté d'extension, a directory of Firefox extensions in French.
- Some UserScripts.
- And also my personal website!
Languages
Spoken languages
- French (Mother tongue)
- German (basic level)
- English (good level)
Programming languages
- R
- Perl
- SQL (PostgreSQL, MySQL)
- PHP, Java, Ruby
Web technologies
- (X)HTML
- CSS
- Accessibility
- CGI
- MVC frameworks (Perl/Catalyst)
- JavaScript
- Linux server administration (apache, postfix, …)